CLUSS clustering result Executing time : 212 ------------------------------------------------- ------------------------------------------------- Number of sub-families: 40 ------------------------------------------------- Sub-family 1: 6 sequences 0 AF0411 15 FN1579 29 SA0488 26 L0348 27 SPy1941 28 SP0591 ------------------------------------------------- Sub-family 2: 6 sequences 5 PH0636 6 PAB0931 13 aq_1068 30 lin0271 31 BS_cysS 32 BH0111 ------------------------------------------------- Sub-family 3: 11 sequences 35 cysS 36 ZcysS 37 ECs0588 39 STM0537 38 YPO3073 43 HI0078 44 PM0945 41 VC1848 42 PA1795 40 BU487 46 NMB2083 ------------------------------------------------- Sub-family 4: 2 sequences 8 SSO2280 9 APE1592 ------------------------------------------------- Sub-family 5: 3 sequences 33 slr0958 34 all1092 48 RSc1167 ------------------------------------------------- Sub-family 6: 4 sequences 7 PAE0821 10 YNL247w 11 SPAC29E6.06c 12 ECU08g0490 ------------------------------------------------- Sub-family 7: 4 sequences 3 Ta1147 4 TVN1244 14 TM0719 17 CAC3177 ------------------------------------------------- Sub-family 8: 2 sequences 2 MA0749 16 DR1670 ------------------------------------------------- Sub-family 9: 8 sequences 45 XF0995 56 CC0460 52 AGc1982 53 SMc02551 55 mlr7799 54 BMEI1272 57 RP085 58 RC0111 ------------------------------------------------- Sub-family 10: 3 sequences 49 HP0886 50 jhp0818 51 Cj0802 ------------------------------------------------- Sub-family 11: 4 sequences 1 VNG1097G 19 Cgl2589 21 Rv3580c 23 MT3686 ------------------------------------------------- Sub-family 12: 3 sequences 59 CT782 60 CPn0932 64 MYPU_1770_2 ------------------------------------------------- Sub-family 13: 3 sequences 63 UU123 65 MPN356 66 MG253 ------------------------------------------------- Sub-family 14: 2 sequences 61 TP0091 62 BB0599 ------------------------------------------------- Sub-family 15: 4 sequences 18 Cgl1478 20 Rv2130c 22 MT2188 25 ML1302 ------------------------------------------------- Sub-family 16: 18 sequences 24 ML0323 304 Rv0631c 305 MT0659 316 XF0422 306 recC 307 ZrecC 308 ECs3679 310 STM2996 309 YPO1018 312 VC2322 313 PA4285 314 HI0942 315 PM0961 317 NMB1720 311 BU453 321 BB0634 319 CT640 320 CPn0737 ------------------------------------------------- Sub-family 17: 23 sequences 405 FN1362 406 yejF 407 ZyejF 408 ECs3072 410 STM2219 411 VCA0588 409 YPO1270 413 PA1807 414 PA2061 412 VCA0977 419 SMb21199 417 AGl1210 427 mlr7600 423 BMEII0738 416 AGc320 421 SMc02829 422 BMEI1938 424 mll5490 418 AGl438 420 SMb21644 426 mlr6448 415 RSc1176 425 mlr1190 ------------------------------------------------- Sub-family 18: 7 sequences 279 NMA1016 280 NMA1508 445 yfaA 446 ZyfaA 447 ECs3113 448 PA4491 449 RSc3032 ------------------------------------------------- Sub-family 19: 13 sequences 322 TM0495 327 BS_ylaK 328 BH2629 334 CT015 335 CPn0106 323 Cgl0065 324 Rv1095 325 MT1127 326 ML1951 329 VC2507 330 PA3919 333 RSc1316 332 XF0960 ------------------------------------------------- Sub-family 20: 14 sequences 365 AF1372 367 MTH1134 371 MJ1192m 372 MK0178 373 MK0266 378 sll1226 379 alr0766 366 MA0975 368 MTH1300 369 MJ0029 370 MJ0727 375 PH1294 377 PAB1787 376 PAB0641 ------------------------------------------------- Sub-family 21: 1 sequences 374 MK0537 ------------------------------------------------- Sub-family 22: 54 sequences 126 AGl927 176 alr3452 178 Z4799 181 ECs4280 159 aq_1191 160 TM0250 174 slr1197 175 all1325 162 FN1068 170 SA1092 171 lin1313 172 BS_smf 173 BH2468 168 SPy1163 169 SP1266 201 TP0393 163 DR0120 185 PA0021 189 NMB0116 191 RSc0068 199 CC2447 195 AGc2400 196 SMc01363 197 BMEII0667 198 mlr0689 188 XF0924 177 smf 179 Zsmf 180 ECs4151 183 STM3405 182 YPO0243 184 VC0048 186 HI0985 187 PM1599 165 Cgl1982 166 Rv2896c 167 MT2964 164 CAC1784 161 FN0571 192 HP0333 193 jhp0316 194 Cj0634 202 BB0297 398 CAC1833 399 SA1148 400 lin1335 401 BS_ynbB 402 BH2361 403 slr0580 404 alr1600 390 PA2064 392 RSp0657 391 XF0133 393 CC0965 ------------------------------------------------- Sub-family 23: 6 sequences 203 UU591 204 MYPU_5470 435 FN0719 436 PA2852 438 RSc1070 363 NMA1049 ------------------------------------------------- Sub-family 24: 1 sequences 437 NMA1132 ------------------------------------------------- Sub-family 25: 98 sequences 67 AF0086 147 mll8571 135 SMc02345 281 NMA1573 68 AF0639 137 BMEII0107 69 MA0064 71 MK0602 82 SA0168 70 MJ0413 95 tauC 96 ZtauC 98 ECs0421 100 YPO0184 110 PA3936 132 SMb21528 150 mlr4519 138 BMEII0799 104 PA2295 106 PA2327 88 sll1451 90 all3335 89 slr0041 92 alr2878 91 alr0609 124 AGl1888 129 SMa0583 149 mlr2860 154 CC0610 113 RSc0380 75 DR0511_2 103 PA0185 83 BS_ssuC 101 YPO2287 105 PA2307 116 RSp1508 80 Cgl1193 122 AGl128GM 94 ssuC 97 ZycbM 99 ECs1017 115 RSc1340 102 YPO3626 123 AGl1398 107 PA3443 145 mll4557 128 AGpT164 148 mll9180 127 AGpT116 86 BH2681 111 HI0355 112 PM1265 125 AGl3063 108 PA3448 151 mlr6798 117 AGc1933 144 mll1758 119 AGc4334 133 SMc01825 143 mll1624 120 AGc4335 134 SMc01826 142 mll1623 76 DR2197 131 SMb20571 130 SMb20182 380 AF2386 384 nrfD 385 ZnrfD 386 ECs5055 387 STM4280 388 HI1066 389 PM0026 78 CAC0618 84 BS_ytlD 114 RSc1200 139 BMEII0962 121 AGl1202 146 mll6977 153 mlr7951 73 TM0485 141 mll1292 156 CC2635 157 CT854_1 158 CPn1012_1 74 FN0237 81 SP2198 79 CAC1399 109 PA3512 77 CAC0108 85 BH1210 87 sll1081 118 AGc257 140 mll1254 136 BMEI1739 152 mlr7114 72 TM0203 93 alr3287 ------------------------------------------------- Sub-family 26: 9 sequences 155 CC1832 381 PAE2836 382 PAE2861 383 SSO2797 364 RSc0944 479 SMb20421 480 SMc01466 481 SMc03886 482 SMc03892 ------------------------------------------------- Sub-family 27: 4 sequences 450 SPy0303 452 SPy1807 453 SPy2180 451 SPy1574 ------------------------------------------------- Sub-family 28: 17 sequences 457 b1458 464 Z0275 472 ECs0245 459 ybfD 461 ydcC 465 Z0700 473 ECs0602 462 yhhI 463 Z0271 471 ECs0241 468 Z0857 474 ECs0731 460 ybfL 466 Z0854 469 Z2253 475 ECs2062 470 Z2254 ------------------------------------------------- Sub-family 29: 1 sequences 455 all8065 ------------------------------------------------- Sub-family 30: 1 sequences 467 Z0856 ------------------------------------------------- Sub-family 31: 7 sequences 331 XF0959 394 MA3992 395 MTH1180 396 MJ0094 397 MK0583 428 Rv0923c_2 429 MT0950_2 ------------------------------------------------- Sub-family 32: 96 sequences 205 aq_1464 226 SA1324 211 CAC1851 217 L107724 220 SPy0369 225 SP1874 228 lin2063 230 BS_ypuL 233 BH1576 209 FN0756 213 Cgl1392 214 Rv1711 215 MT1751.1 216 ML1370 292 mlr2177 210 DR0896 235 slr0361 237 all3873 240 yciL 244 ZyciL 248 ECs1841 255 STM1719 253 YPO2213 260 VC1179 268 HI1199 271 PM0661 265 PA3179 274 XF2453 277 NMB1361 258 BU282 283 RSc1286 288 AGc1238 290 SMc00904 291 BMEII1039 293 mlr8253 289 SMb20024 294 CC0230 302 BB0129 299 CT723 300 CPn0864 219 L189881 242 ymfC 246 ZymfC 252 YPO1640 247 ECs1607 254 STM1237 267 HI0694 272 PM1605 259 VC1140 238 alr0545 266 PA3968 236 slr0612 278 NMB1496 206 aq_554 207 TM0264 208 FN0717 229 lin2436 223 SP0280 227 SA1574 234 BH3273 222 SPy1398 212 CAC2676 218 L109527 221 SPy1337 224 SP0680 239 rsuA 243 ZrsuA 249 ECs3075 256 STM2222 251 YPO1266 269 HI1243 270 PM0003 261 VC1635 263 PA0733 273 XF1200 296 CC1838 282 RSc0674 276 NMB1298 241 yjbC 245 ZyjbC 250 ECs5005 257 STM4193 262 VC2223 264 PA1110 275 NMB0806 284 RSc1401_2 295 CC0855 297 RP544 298 RC0807 285 HP1459 286 jhp1352 287 Cj1709c 301 TP0459 303 MYPU_3370 231 BS_ytzF 232 BS_ytzG ------------------------------------------------- Sub-family 33: 5 sequences 430 BS_yjqB 431 BS_ymaC 433 BS_yoqZ 432 BS_yndL 434 mlr6307 ------------------------------------------------- Sub-family 34: 2 sequences 190 NMA0158 318 NMA1974 ------------------------------------------------- Sub-family 35: 11 sequences 352 yjgA 353 ZyjgA 354 ECs5211 356 STM4437 355 YPO3691 359 HI1151 360 PM0119 357 VC2536 358 PA4473 361 XF1130 362 NMB0840 ------------------------------------------------- Sub-family 36: 2 sequences 483 lin0165 484 BH3521 ------------------------------------------------- Sub-family 37: 5 sequences 47 NMA0347 454 all8064 458 b1459 478 ECs2833 200 RC0450 ------------------------------------------------- Sub-family 38: 7 sequences 439 CAC2675 440 SA1723 441 lin1875 442 BS_yerC 443 BH0639 444 XF2221 456 asr2499 ------------------------------------------------- Sub-family 39: 4 sequences 476 ECs2063 477 ECs2832 485 AGc1757 486 BMEI1347 ------------------------------------------------- Sub-family 40: 16 sequences 336 AF1113 338 MA3696 339 MTH268 341 MK1455 342 Ta1093 343 TVN0482 344 PH1910a 345 PAB3419a 340 MJ0393 337 VNG2047G 346 PAE2432 347 SSO5844 348 APE1132a 349 YLR167w_2 350 SPAC589.10c_2 351 SPAC6G10.11c_2 -------------------------------------------------