CLUSS clustering result 
Executing time : 212 
-------------------------------------------------
-------------------------------------------------

Number of sub-families: 40 
-------------------------------------------------
Sub-family 1: 6 sequences

		0     AF0411
		15    FN1579
		29    SA0488
		26    L0348
		27    SPy1941
		28    SP0591
-------------------------------------------------
Sub-family 2: 6 sequences

		5     PH0636
		6     PAB0931
		13    aq_1068
		30    lin0271
		31    BS_cysS
		32    BH0111
-------------------------------------------------
Sub-family 3: 11 sequences

		35    cysS
		36    ZcysS
		37    ECs0588
		39    STM0537
		38    YPO3073
		43    HI0078
		44    PM0945
		41    VC1848
		42    PA1795
		40    BU487
		46    NMB2083
-------------------------------------------------
Sub-family 4: 2 sequences

		8     SSO2280
		9     APE1592
-------------------------------------------------
Sub-family 5: 3 sequences

		33    slr0958
		34    all1092
		48    RSc1167
-------------------------------------------------
Sub-family 6: 4 sequences

		7     PAE0821
		10    YNL247w
		11    SPAC29E6.06c
		12    ECU08g0490
-------------------------------------------------
Sub-family 7: 4 sequences

		3     Ta1147
		4     TVN1244
		14    TM0719
		17    CAC3177
-------------------------------------------------
Sub-family 8: 2 sequences

		2     MA0749
		16    DR1670
-------------------------------------------------
Sub-family 9: 8 sequences

		45    XF0995
		56    CC0460
		52    AGc1982
		53    SMc02551
		55    mlr7799
		54    BMEI1272
		57    RP085
		58    RC0111
-------------------------------------------------
Sub-family 10: 3 sequences

		49    HP0886
		50    jhp0818
		51    Cj0802
-------------------------------------------------
Sub-family 11: 4 sequences

		1     VNG1097G
		19    Cgl2589
		21    Rv3580c
		23    MT3686
-------------------------------------------------
Sub-family 12: 3 sequences

		59    CT782
		60    CPn0932
		64    MYPU_1770_2
-------------------------------------------------
Sub-family 13: 3 sequences

		63    UU123
		65    MPN356
		66    MG253
-------------------------------------------------
Sub-family 14: 2 sequences

		61    TP0091
		62    BB0599
-------------------------------------------------
Sub-family 15: 4 sequences

		18    Cgl1478
		20    Rv2130c
		22    MT2188
		25    ML1302
-------------------------------------------------
Sub-family 16: 18 sequences

		24    ML0323
		304   Rv0631c
		305   MT0659
		316   XF0422
		306   recC
		307   ZrecC
		308   ECs3679
		310   STM2996
		309   YPO1018
		312   VC2322
		313   PA4285
		314   HI0942
		315   PM0961
		317   NMB1720
		311   BU453
		321   BB0634
		319   CT640
		320   CPn0737
-------------------------------------------------
Sub-family 17: 23 sequences

		405   FN1362
		406   yejF
		407   ZyejF
		408   ECs3072
		410   STM2219
		411   VCA0588
		409   YPO1270
		413   PA1807
		414   PA2061
		412   VCA0977
		419   SMb21199
		417   AGl1210
		427   mlr7600
		423   BMEII0738
		416   AGc320
		421   SMc02829
		422   BMEI1938
		424   mll5490
		418   AGl438
		420   SMb21644
		426   mlr6448
		415   RSc1176
		425   mlr1190
-------------------------------------------------
Sub-family 18: 7 sequences

		279   NMA1016
		280   NMA1508
		445   yfaA
		446   ZyfaA
		447   ECs3113
		448   PA4491
		449   RSc3032
-------------------------------------------------
Sub-family 19: 13 sequences

		322   TM0495
		327   BS_ylaK
		328   BH2629
		334   CT015
		335   CPn0106
		323   Cgl0065
		324   Rv1095
		325   MT1127
		326   ML1951
		329   VC2507
		330   PA3919
		333   RSc1316
		332   XF0960
-------------------------------------------------
Sub-family 20: 14 sequences

		365   AF1372
		367   MTH1134
		371   MJ1192m
		372   MK0178
		373   MK0266
		378   sll1226
		379   alr0766
		366   MA0975
		368   MTH1300
		369   MJ0029
		370   MJ0727
		375   PH1294
		377   PAB1787
		376   PAB0641
-------------------------------------------------
Sub-family 21: 1 sequences

		374   MK0537
-------------------------------------------------
Sub-family 22: 54 sequences

		126   AGl927
		176   alr3452
		178   Z4799
		181   ECs4280
		159   aq_1191
		160   TM0250
		174   slr1197
		175   all1325
		162   FN1068
		170   SA1092
		171   lin1313
		172   BS_smf
		173   BH2468
		168   SPy1163
		169   SP1266
		201   TP0393
		163   DR0120
		185   PA0021
		189   NMB0116
		191   RSc0068
		199   CC2447
		195   AGc2400
		196   SMc01363
		197   BMEII0667
		198   mlr0689
		188   XF0924
		177   smf
		179   Zsmf
		180   ECs4151
		183   STM3405
		182   YPO0243
		184   VC0048
		186   HI0985
		187   PM1599
		165   Cgl1982
		166   Rv2896c
		167   MT2964
		164   CAC1784
		161   FN0571
		192   HP0333
		193   jhp0316
		194   Cj0634
		202   BB0297
		398   CAC1833
		399   SA1148
		400   lin1335
		401   BS_ynbB
		402   BH2361
		403   slr0580
		404   alr1600
		390   PA2064
		392   RSp0657
		391   XF0133
		393   CC0965
-------------------------------------------------
Sub-family 23: 6 sequences

		203   UU591
		204   MYPU_5470
		435   FN0719
		436   PA2852
		438   RSc1070
		363   NMA1049
-------------------------------------------------
Sub-family 24: 1 sequences

		437   NMA1132
-------------------------------------------------
Sub-family 25: 98 sequences

		67    AF0086
		147   mll8571
		135   SMc02345
		281   NMA1573
		68    AF0639
		137   BMEII0107
		69    MA0064
		71    MK0602
		82    SA0168
		70    MJ0413
		95    tauC
		96    ZtauC
		98    ECs0421
		100   YPO0184
		110   PA3936
		132   SMb21528
		150   mlr4519
		138   BMEII0799
		104   PA2295
		106   PA2327
		88    sll1451
		90    all3335
		89    slr0041
		92    alr2878
		91    alr0609
		124   AGl1888
		129   SMa0583
		149   mlr2860
		154   CC0610
		113   RSc0380
		75    DR0511_2
		103   PA0185
		83    BS_ssuC
		101   YPO2287
		105   PA2307
		116   RSp1508
		80    Cgl1193
		122   AGl128GM
		94    ssuC
		97    ZycbM
		99    ECs1017
		115   RSc1340
		102   YPO3626
		123   AGl1398
		107   PA3443
		145   mll4557
		128   AGpT164
		148   mll9180
		127   AGpT116
		86    BH2681
		111   HI0355
		112   PM1265
		125   AGl3063
		108   PA3448
		151   mlr6798
		117   AGc1933
		144   mll1758
		119   AGc4334
		133   SMc01825
		143   mll1624
		120   AGc4335
		134   SMc01826
		142   mll1623
		76    DR2197
		131   SMb20571
		130   SMb20182
		380   AF2386
		384   nrfD
		385   ZnrfD
		386   ECs5055
		387   STM4280
		388   HI1066
		389   PM0026
		78    CAC0618
		84    BS_ytlD
		114   RSc1200
		139   BMEII0962
		121   AGl1202
		146   mll6977
		153   mlr7951
		73    TM0485
		141   mll1292
		156   CC2635
		157   CT854_1
		158   CPn1012_1
		74    FN0237
		81    SP2198
		79    CAC1399
		109   PA3512
		77    CAC0108
		85    BH1210
		87    sll1081
		118   AGc257
		140   mll1254
		136   BMEI1739
		152   mlr7114
		72    TM0203
		93    alr3287
-------------------------------------------------
Sub-family 26: 9 sequences

		155   CC1832
		381   PAE2836
		382   PAE2861
		383   SSO2797
		364   RSc0944
		479   SMb20421
		480   SMc01466
		481   SMc03886
		482   SMc03892
-------------------------------------------------
Sub-family 27: 4 sequences

		450   SPy0303
		452   SPy1807
		453   SPy2180
		451   SPy1574
-------------------------------------------------
Sub-family 28: 17 sequences

		457   b1458
		464   Z0275
		472   ECs0245
		459   ybfD
		461   ydcC
		465   Z0700
		473   ECs0602
		462   yhhI
		463   Z0271
		471   ECs0241
		468   Z0857
		474   ECs0731
		460   ybfL
		466   Z0854
		469   Z2253
		475   ECs2062
		470   Z2254
-------------------------------------------------
Sub-family 29: 1 sequences

		455   all8065
-------------------------------------------------
Sub-family 30: 1 sequences

		467   Z0856
-------------------------------------------------
Sub-family 31: 7 sequences

		331   XF0959
		394   MA3992
		395   MTH1180
		396   MJ0094
		397   MK0583
		428   Rv0923c_2
		429   MT0950_2
-------------------------------------------------
Sub-family 32: 96 sequences

		205   aq_1464
		226   SA1324
		211   CAC1851
		217   L107724
		220   SPy0369
		225   SP1874
		228   lin2063
		230   BS_ypuL
		233   BH1576
		209   FN0756
		213   Cgl1392
		214   Rv1711
		215   MT1751.1
		216   ML1370
		292   mlr2177
		210   DR0896
		235   slr0361
		237   all3873
		240   yciL
		244   ZyciL
		248   ECs1841
		255   STM1719
		253   YPO2213
		260   VC1179
		268   HI1199
		271   PM0661
		265   PA3179
		274   XF2453
		277   NMB1361
		258   BU282
		283   RSc1286
		288   AGc1238
		290   SMc00904
		291   BMEII1039
		293   mlr8253
		289   SMb20024
		294   CC0230
		302   BB0129
		299   CT723
		300   CPn0864
		219   L189881
		242   ymfC
		246   ZymfC
		252   YPO1640
		247   ECs1607
		254   STM1237
		267   HI0694
		272   PM1605
		259   VC1140
		238   alr0545
		266   PA3968
		236   slr0612
		278   NMB1496
		206   aq_554
		207   TM0264
		208   FN0717
		229   lin2436
		223   SP0280
		227   SA1574
		234   BH3273
		222   SPy1398
		212   CAC2676
		218   L109527
		221   SPy1337
		224   SP0680
		239   rsuA
		243   ZrsuA
		249   ECs3075
		256   STM2222
		251   YPO1266
		269   HI1243
		270   PM0003
		261   VC1635
		263   PA0733
		273   XF1200
		296   CC1838
		282   RSc0674
		276   NMB1298
		241   yjbC
		245   ZyjbC
		250   ECs5005
		257   STM4193
		262   VC2223
		264   PA1110
		275   NMB0806
		284   RSc1401_2
		295   CC0855
		297   RP544
		298   RC0807
		285   HP1459
		286   jhp1352
		287   Cj1709c
		301   TP0459
		303   MYPU_3370
		231   BS_ytzF
		232   BS_ytzG
-------------------------------------------------
Sub-family 33: 5 sequences

		430   BS_yjqB
		431   BS_ymaC
		433   BS_yoqZ
		432   BS_yndL
		434   mlr6307
-------------------------------------------------
Sub-family 34: 2 sequences

		190   NMA0158
		318   NMA1974
-------------------------------------------------
Sub-family 35: 11 sequences

		352   yjgA
		353   ZyjgA
		354   ECs5211
		356   STM4437
		355   YPO3691
		359   HI1151
		360   PM0119
		357   VC2536
		358   PA4473
		361   XF1130
		362   NMB0840
-------------------------------------------------
Sub-family 36: 2 sequences

		483   lin0165
		484   BH3521
-------------------------------------------------
Sub-family 37: 5 sequences

		47    NMA0347
		454   all8064
		458   b1459
		478   ECs2833
		200   RC0450
-------------------------------------------------
Sub-family 38: 7 sequences

		439   CAC2675
		440   SA1723
		441   lin1875
		442   BS_yerC
		443   BH0639
		444   XF2221
		456   asr2499
-------------------------------------------------
Sub-family 39: 4 sequences

		476   ECs2063
		477   ECs2832
		485   AGc1757
		486   BMEI1347
-------------------------------------------------
Sub-family 40: 16 sequences

		336   AF1113
		338   MA3696
		339   MTH268
		341   MK1455
		342   Ta1093
		343   TVN0482
		344   PH1910a
		345   PAB3419a
		340   MJ0393
		337   VNG2047G
		346   PAE2432
		347   SSO5844
		348   APE1132a
		349   YLR167w_2
		350   SPAC589.10c_2
		351   SPAC6G10.11c_2
-------------------------------------------------
