CLUSS clustering result Executing time : 381 ------------------------------------------------- ------------------------------------------------- Number of sub-families: 90 ------------------------------------------------- Sub-family 1: 69 sequences 0 VNG6280G 118 AGl1773 134 AGl624 117 AGl1293 26 TM1122 88 ugpE 90 ZugpE 93 ECs4297 100 STM3555 99 YPO3794 106 RSc1266 124 AGl3246 146 SMb20418 172 BMEII0623 101 VC1551 113 AGc532 131 AGl3420 180 mll3501 171 BMEII0622 2 Ta0689 4 TVN1145 7 PH0755 24 TM0598 37 Rv2039c 41 MT2099 45 ML1425 81 BH3688 85 all0261 116 AGl1221 133 AGl460 30 CAC0428 74 BH1866 71 BH1078 55 lin0219 56 lin0761 58 lin1843 76 BH1926 187 mll7213 62 BS_araQ 69 BH0903 137 AGpA376 79 BH2724 156 SMb21654 84 slr1723 86 all4824 87 all5282 105 XF2446 144 SMb20233 64 BS_yesQ 72 BH1119 129 AGl3392 164 SMc04137 95 YPO1721 128 AGl3353 3 TVN0207 127 AGl3322 195 mlr6438 115 AGl1015 154 SMb21593 114 AGc688 168 BMEII0114 177 mll1714 16 SSO2849 17 SSO3068 28 TM1853 97 YPO2475 202 MYPU_0280 205 MPN136 206 MG189 ------------------------------------------------- Sub-family 2: 24 sequences 1 Ta0146 14 SSO1001 21 TM0279 122 AGl3066 152 SMb21219 192 mlr3641 5 PH0023 11 PAB2335 27 TM1233 19 APE1633 8 PH1036 18 APE0040 13 PAE1322 83 slr0531 109 AGc1050 163 SMc03063 184 mll5110 34 Cgl1351 39 Rv2834c 43 MT2900 38 Rv2317 42 MT2380 46 ML1769 139 AGpA79 ------------------------------------------------- Sub-family 3: 12 sequences 29 DR1436 121 AGl2962 145 SMb20327 174 BMEII0942 153 SMb21458 73 BH1246 148 SMb20658 33 Cgl0703 36 Rv1237 40 MT1275 44 ML1088 96 YPO1895 ------------------------------------------------- Sub-family 4: 4 sequences 60 lin2970 89 ycjP 91 ZycjP 92 ECs1891 ------------------------------------------------- Sub-family 5: 18 sequences 52 SP1688 104 PM1760 194 mlr4913 80 BH3682 136 AGpA119 189 mlr2246 147 SMb20632 149 SMb20969 169 BMEII0541 182 mll4146 66 BS_yurM 188 mll8486 141 SMa1341 185 mll5300 190 mlr2328 98 YPO3470 198 mlr7094 199 mlr7227 ------------------------------------------------- Sub-family 6: 15 sequences 110 AGc2592 201 TP0076 138 AGpA680 140 SMa0711 111 AGc4555 158 SMc01626 200 mlr7265 112 AGc4716 151 SMb21150 125 AGl3273 159 SMc01979 176 mll0851 150 SMb21105 167 BMEI1714 186 mll7152 ------------------------------------------------- Sub-family 7: 4 sequences 108 RSc3049 119 AGl1910 175 mll0704 161 SMc02516 ------------------------------------------------- Sub-family 8: 11 sequences 6 PH0204 10 PAB2231 20 APE2252 22 TM0420 57 lin0854 102 PA2340 107 RSc2142 126 AGl3281 135 AGl835 183 mll4924 157 SMc01498 ------------------------------------------------- Sub-family 9: 3 sequences 130 AGl3416 155 SMb21602 181 mll3588 ------------------------------------------------- Sub-family 10: 48 sequences 9 PH1216 82 BH3847 12 PAE0686 103 PA3188 166 SMc04394 170 BMEII0592 196 mlr6653 191 mlr3053 120 AGl2945 165 SMc04257 178 mll3315 35 Cgl2406 123 AGl3158 160 SMc02473 48 SPy0255 51 SP1681 61 BS_amyC 78 BH2224 143 SMa2309 162 SMc02871 173 BMEII0752 193 mlr4774 608 SMc02872 619 BMEII0753 639 mlr4772 25 TM0812 94 YPO0614 376 NMA1518 32 CAC3670 54 SP1895 203 MYPU_1000 454 SSO2714_1 204 MYPU_4990 439 TVN0206 23 TM0430 63 BS_lplC 65 BS_ytcP 67 BH0481 70 BH1066 132 AGl3561 53 SP1797 75 BH1912 77 BH2113 47 L128777 49 SPy1593 50 SP0091 59 lin2116 68 BH0795 ------------------------------------------------- Sub-family 11: 5 sequences 15 SSO2714_2 461 TM0419 472 CAC0665 561 AGl1012 600 SMb21594 ------------------------------------------------- Sub-family 12: 31 sequences 436 Ta0127 453 SSO1170 493 SP1689 550 PM1761 536 YPO0613 522 slr0530 555 AGc1048 631 mll5112 609 SMc03062 444 PH1038 450 PAE1323 457 APE0038 548 PA2339 553 RSc2143 572 AGl3284 603 SMc01497 580 AGl839 630 mll4925 445 PH1215 449 PAE0688 473 CAC3671 494 SP1896 521 BH3846 549 PA3189 612 SMc04395 617 BMEII0591 637 mlr3052 642 mlr6652 566 AGl2943 611 SMc04258 625 mll3316 ------------------------------------------------- Sub-family 13: 5 sequences 442 PH0205 447 PAB2230 459 APE2253 563 AGl1295 636 mlr2327 ------------------------------------------------- Sub-family 14: 3 sequences 477 Rv1236 481 MT1274 485 ML1087 ------------------------------------------------- Sub-family 15: 3 sequences 479 Rv2316 483 MT2379 487 ML1768 ------------------------------------------------- Sub-family 16: 3 sequences 587 SMa1339 626 mll3383 632 mll5301 ------------------------------------------------- Sub-family 17: 4 sequences 502 lin2971 529 ycjO 532 ZycjO 533 ECs1890 ------------------------------------------------- Sub-family 18: 66 sequences 443 PH0754 520 BH3689 526 alr2532 582 AGpA377 594 SMb20659 478 Rv2040c 482 MT2100 486 ML1426 506 BS_yurN 590 SMb20232 595 SMb20970 497 lin0218 500 lin1842 513 BH1865 505 BS_yesP 511 BH1118 575 AGl3390 610 SMc04136 538 YPO1722 574 AGl3351 504 BS_araP 509 BH0902 498 lin0760 525 alr0789 588 SMa1363 647 TP0075 560 AGc686 614 BMEII0113 624 mll1715 523 slr1202 524 alr0738 596 SMb21104 633 mll7153 613 BMEI1715 584 AGpA678 586 SMa0710 465 TM1121 562 AGl1220 604 SMc01627 646 mlr7264 503 BS_amyD 516 BH2225 643 mlr7001 644 mlr7093 645 mlr7226 564 AGl1775 579 AGl623 568 AGl3068 573 AGl3320 641 mlr6436 551 XF2447 634 mll8487 569 AGl3156 606 SMc02472 475 Cgl1350 480 Rv2835c 484 MT2901 557 AGc4553 583 AGpA586 558 AGc4717 597 SMb21149 571 AGl3272 605 SMc01978 623 mll0853 598 SMb21220 638 mlr3640 ------------------------------------------------- Sub-family 19: 12 sequences 489 SPy0254 492 SP1682 581 AGpA117 593 SMb20633 635 mlr2245 576 AGl3415 601 SMb21603 628 mll3589 578 AGl458 648 MYPU_0270 652 MPN135 653 MG188 ------------------------------------------------- Sub-family 20: 3 sequences 437 Ta0145 452 SSO1000 539 YPO1894 ------------------------------------------------- Sub-family 21: 5 sequences 528 ugpA 531 ZugpA 534 ECs4298 544 STM3556 543 YPO3795 ------------------------------------------------- Sub-family 22: 6 sequences 546 VC1550 552 RSc1265 559 AGc531 570 AGl3247 592 SMb20417 618 BMEII0624 ------------------------------------------------- Sub-family 23: 2 sequences 577 AGl3422 627 mll3502 ------------------------------------------------- Sub-family 24: 4 sequences 468 TM1854 540 YPO2476 499 lin0853 519 BH3681 ------------------------------------------------- Sub-family 25: 14 sequences 441 PH0024 448 PAB2334 458 APE1632 467 TM1234 589 SMa2307 640 mlr4912 470 DR1437 567 AGl2963 591 SMb20326 599 SMb21459 474 Cgl0704 512 BH1245 621 BMEII0944 620 BMEII0943 ------------------------------------------------- Sub-family 26: 5 sequences 463 TM0596 514 BH1925 629 mll4147 471 CAC0427 510 BH1077 ------------------------------------------------- Sub-family 27: 7 sequences 466 TM1203 527 malF 535 ECs5016 530 ZmalF 545 STM4228 542 YPO3715 547 VCA0944 ------------------------------------------------- Sub-family 28: 13 sequences 469 DR0562 491 SPy1301 501 lin2229 507 BS_yvdH 495 SP2109 496 SA0208 518 BH2925 508 BS_yvfL 515 BH2020 537 YPO0855 651 MYPU_6390_2 488 L128696 490 SPy1295 ------------------------------------------------- Sub-family 29: 2 sequences 556 AGc2593 650 MYPU_4980 ------------------------------------------------- Sub-family 30: 8 sequences 438 Ta0690 440 TVN1144 585 AGpA78 455 SSO2848 456 SSO3067 464 TM0811 517 BH2725 602 SMb21653 ------------------------------------------------- Sub-family 31: 12 sequences 31 CAC0666 446 PAB0120 451 PAE3456 462 TM0431 554 RSc3048 565 AGl1909 607 SMc02517 622 mll0705 179 mll3381 197 mlr7002 460 TM0278 541 YPO3471 ------------------------------------------------- Sub-family 32: 2 sequences 476 Cgl2407 649 MYPU_1010 ------------------------------------------------- Sub-family 33: 5 sequences 142 SMa1362 703 mlr2358 699 PA0081 702 mlr2345 701 AGl1057 ------------------------------------------------- Sub-family 34: 14 sequences 672 SPCC417.12 673 DR0415 682 SA2240 674 DR2626 683 BS_pnbA 675 CAP0050 678 Rv1104 684 STM1623 680 Rv2045c 681 MT2105 686 CC0799 676 Cgl1109 685 RSc2593 677 Cgl2249 ------------------------------------------------- Sub-family 35: 6 sequences 719 MA4546 720 MTH1129 722 MJ0083 723 MJ0846 724 MK0655 721 MTH1164 ------------------------------------------------- Sub-family 36: 4 sequences 740 gcd 741 Zgcd 742 ECs0128 743 STM0169 ------------------------------------------------- Sub-family 37: 4 sequences 745 PA2290 746 AGl1436 749 SMc00110 750 mll1500 ------------------------------------------------- Sub-family 38: 1 sequences 747 AGl2936 ------------------------------------------------- Sub-family 39: 2 sequences 744 PA1982 748 SMb20173 ------------------------------------------------- Sub-family 40: 8 sequences 751 YAL029c 755 YOR326w 759 SPCC1919.10c 752 YHR023w 756 SPAC4A8.05c 761 ECU04g1000 760 SPCC645.05c 758 SPBC2D10.14c ------------------------------------------------- Sub-family 41: 3 sequences 753 YKL129c 754 YMR109w 757 SPBC146.13c ------------------------------------------------- Sub-family 42: 1 sequences 762 ECU09g1970 ------------------------------------------------- Sub-family 43: 1 sequences 253 aq_1281 ------------------------------------------------- Sub-family 44: 1 sequences 254 TM0108 ------------------------------------------------- Sub-family 45: 5 sequences 255 FN1520 294 HP0648 295 jhp0593 303 RP579 304 RC0883 ------------------------------------------------- Sub-family 46: 15 sequences 280 murA 281 ZmurA 282 ECs4068 284 STM3307 283 YPO3569 286 VC2514 288 HI1081 289 PM0180 285 BU386 287 PA4450 291 NMB0011 293 RSc2953 290 XF1415 296 Cj0858c 301 mll7251 ------------------------------------------------- Sub-family 47: 7 sequences 278 slr0017 279 all0174 297 AGc953 298 SMc02305 300 mll6459 299 BMEI1666 302 CC2350 ------------------------------------------------- Sub-family 48: 8 sequences 257 CAC2862 265 L134243 266 SPy0763 269 SP1966 270 SA1902 272 lin2670 274 BS_murA 276 BH3749 ------------------------------------------------- Sub-family 49: 9 sequences 256 DR1123 258 CAC3539 264 L113067 267 SPy1358 268 SP1081 271 SA1926 273 lin2697 275 BS_murZ 277 BH3784 ------------------------------------------------- Sub-family 50: 4 sequences 260 Cgl2505 261 Rv1315 262 MT1355 263 ML1150 ------------------------------------------------- Sub-family 51: 1 sequences 259 Cgl0351 ------------------------------------------------- Sub-family 52: 2 sequences 305 CT455 306 CPn0571 ------------------------------------------------- Sub-family 53: 2 sequences 307 TP0029 308 BB0472 ------------------------------------------------- Sub-family 54: 5 sequences 695 Z0258 696 ECs0227 697 YPO3595 698 VCA0112 700 PA1665 ------------------------------------------------- Sub-family 55: 1 sequences 392 AF2021 ------------------------------------------------- Sub-family 56: 2 sequences 393 MTH1024 394 MK0168 ------------------------------------------------- Sub-family 57: 4 sequences 397 aq_845 425 HP1373 426 jhp1287 427 Cj0276 ------------------------------------------------- Sub-family 58: 1 sequences 413 all0087 ------------------------------------------------- Sub-family 59: 11 sequences 414 mreB 416 ECs4123 415 ZmreB 417 YPO3665 418 STM3374 419 VC0415 420 PA4481 423 XF1309 421 HI0037 422 PM1955 424 RSc0059 ------------------------------------------------- Sub-family 60: 3 sequences 428 CC1543 429 RP768 430 RC1198 ------------------------------------------------- Sub-family 61: 11 sequences 401 FN1577 402 CAC1242 404 lin1583 408 BS_mreB 411 BH3031 403 CAC2858 431 CT709 432 CPn0850 405 lin1825 409 BS_mreBH 410 BH0843 ------------------------------------------------- Sub-family 62: 5 sequences 398 TM0588 399 TM1544 406 lin2669 407 BS_mbl 412 BH3739 ------------------------------------------------- Sub-family 63: 2 sequences 433 TP0497 434 BB0715 ------------------------------------------------- Sub-family 64: 1 sequences 400 FN0758 ------------------------------------------------- Sub-family 65: 7 sequences 350 SSO0472 391 CC3029 356 Rv0162c 360 MT0171 380 AGl1150 385 SMc03929 387 BMEII0867 ------------------------------------------------- Sub-family 66: 3 sequences 351 YDL168w 353 SPCC13B11.04c 352 SPBC1539.07c ------------------------------------------------- Sub-family 67: 7 sequences 366 sll0990 368 adhC 369 ZadhC 370 ECs0411 372 STM1627 374 HI0185 375 NMB1304 ------------------------------------------------- Sub-family 68: 10 sequences 367 all2810 390 CC2516 377 RSc0605 378 RSp0069 386 BMEI1819 379 AGc3072 382 SMa2113 384 SMc01270 383 SMb20170 388 mlr0872 ------------------------------------------------- Sub-family 69: 2 sequences 371 YPO1502 373 PA3629 ------------------------------------------------- Sub-family 70: 3 sequences 365 BH2011 389 CC2396 381 AGpA280 ------------------------------------------------- Sub-family 71: 4 sequences 357 Rv0761c 361 MT0786 359 Rv3086 363 MT3171 ------------------------------------------------- Sub-family 72: 4 sequences 354 Cgl0319 358 Rv2259 362 MT2320 364 ML1784 ------------------------------------------------- Sub-family 73: 1 sequences 355 Cgl2417_1 ------------------------------------------------- Sub-family 74: 2 sequences 395 Ta0583 396 TVN0641 ------------------------------------------------- Sub-family 75: 8 sequences 654 AF2073 661 MK0816 658 MTH403 655 AF2207 656 MA0010 659 MJ0318 660 MK0116 657 MTH1259 ------------------------------------------------- Sub-family 76: 1 sequences 292 NMA0258 ------------------------------------------------- Sub-family 77: 10 sequences 662 AF1931 663 MA0307 665 MA4176 664 MA0832 666 MTH1558 671 MK1530 668 MTH918_1 670 MJ1171 667 MTH238 669 MJ0658 ------------------------------------------------- Sub-family 78: 3 sequences 309 VNG2443G 435 VNG6279G 311 DR2263 ------------------------------------------------- Sub-family 79: 8 sequences 687 SPAC27D7.08c 688 ybiN 689 ZybiN 690 ECs0885 692 STM0826 691 YPO2519 694 PA3840 693 VC1614 ------------------------------------------------- Sub-family 80: 2 sequences 616 BMEII0483 679 Rv1105 ------------------------------------------------- Sub-family 81: 5 sequences 732 yciW_1 733 ZyciW_1 734 ECs1860_1 736 STM1701_1 735 YPO2360_1 ------------------------------------------------- Sub-family 82: 9 sequences 704 DR1099 705 DR2451 706 Cgl2899 707 sll0788 709 all7594 708 all4988 710 all7633 712 SMc00921 713 mlr5326 ------------------------------------------------- Sub-family 83: 9 sequences 714 CAC2123 717 BS_sbp 718 BH2560 715 Rv1824 716 MT1872 731 Cgl2381_1 737 RSc1887_2 738 AGpA623 739 SMb20279 ------------------------------------------------- Sub-family 84: 46 sequences 207 YBR252w 208 SPAC644.05c 210 ECU06g0430 211 aq_220 238 NMB0893 239 NMA1112 228 dut 229 Zdut 230 ECs4515 232 STM3731 231 YPO0047 235 HI0954 236 PM1154 234 PA5321 233 BU560 237 XF0150 240 RSc2463 212 FN1028 243 AGc548 244 SMc00461 246 mll5345 245 BMEI0358 247 CC3713 213 CAC1210 214 CAC1425 250 CT292 251 CPn0059 248 RP399 249 RC0546 241 HP0865 242 jhp0799 252 TP0885 215 Cgl1859 216 Rv2697c 217 MT2771 218 ML1028 226 BS_yncF 227 BS_yosS 219 L181168 223 SPy0235 224 SP0021 225 lin1799 220 L42912 221 L48154 222 L58858 209 ECU05g0280 ------------------------------------------------- Sub-family 85: 37 sequences 310 FN1079 338 HP0243 339 jhp0228 340 Cj1534c 313 Cgl2943 322 slr1894 325 all4145 333 PA0962 337 RSc2687 336 XF1382 344 CC2873 323 all0458 345 RP806 332 VC0139 334 HI1349 335 PM0817 348 BB0690 312 DRB0092 324 all1173 327 dps 328 Zdps 329 ECs0890 331 STM0831 330 YPO2510 341 AGc4495 343 BMEI1980 326 alr3808 314 L85575 315 SPy1531 316 SP1572 317 SA1941 319 BS_dps 321 BH1018 320 BS_mrgA 318 lin0942 342 AGl212 347 TP1038 ------------------------------------------------- Sub-family 86: 6 sequences 615 BMEII0482 726 Rv2740 727 ML0984 728 RSc2589 729 RSc2590 730 CC2961 ------------------------------------------------- Sub-family 87: 2 sequences 349 MYPU_1570 711 SMa1024 ------------------------------------------------- Sub-family 88: 2 sequences 346 RC1240 763 YDR013w ------------------------------------------------- Sub-family 89: 1 sequences 725 MK1487 ------------------------------------------------- Sub-family 90: 1 sequences 764 SPBP23A10.09 -------------------------------------------------