CLUSS clustering result Executing time : 103 ------------------------------------------------- ------------------------------------------------- Number of sub-families: 37 ------------------------------------------------- Sub-family 1: 50 sequences 0 YNL122c_2 6 Cgl1346 2 TM1591 7 Rv1642 8 MT1680 9 ML1395 17 ssl1426 18 asr3427 1 aq_792a 47 UU228 49 MPN116 50 MG197 3 FN0326 4 DR2005 48 MYPU_2600 36 AGc437 37 SMc00363 39 msl5059 38 BMEI2008 40 CC1046 41 RP608 42 RC0934 43 CT834 44 CPn0991 5 CAC2360 29 XF0739 45 TP0849 19 rpmI 20 ZrpmI 21 ECs2424 23 STM1335 22 YPO2431 27 HI1319m 28 PM0603 24 BU127 25 VCA0289 26 PA2742 30 NMB0722 32 RSc1579 33 HP0125 34 jhp0115 35 Cj0244 10 L0430 11 SPy0805 12 SP0960 13 SA1503 14 lin1896 15 BS_rpmI 16 BH3139 46 BB0189 ------------------------------------------------- Sub-family 2: 4 sequences 31 NMA0931 368 AF1957 369 AF1958 372 FN0207 ------------------------------------------------- Sub-family 3: 52 sequences 124 YHR168w 125 SPAP8A3.11c 126 aq_2069 130 CAC1260 135 L0160 136 SPy1333 137 SP1079 139 lin1572 140 BS_obg 141 BH1213 138 SA1470 128 FN1918 160 Cj0096 158 HP0303 159 jhp0288 127 TM0098 131 Cgl2306 132 Rv2440c 134 ML1465 133 MT2516 166 RP843 167 RC1307 129 DR0084 142 slr1090 143 alr3739 144 yhbZ 145 ZyhbZ 146 ECs4062 148 STM3301 147 YPO3509 152 HI0877 153 PM0351 151 PA4566 149 BU389 155 NMB2086 157 RSc2820 150 VC0437 154 XF2422 161 AGc5047 162 SMc03775 163 BMEI0206 164 mll4013 165 CC0315 168 CT418 169 CPn0544 172 UU461 174 MPN563 175 MG384 173 MYPU_3530 171 BB0781 170 TP0742 156 NMA0345 ------------------------------------------------- Sub-family 4: 24 sequences 343 MA3979 348 FN1866 350 BS_yodO 351 BH2255 349 DRA0027 346 aq_454 365 mlr5971 362 AGc4629 363 SMc00355 366 CC0716 364 mll1971 345 aq_1632 347 TM0121 352 BH2943 353 yjeK 354 ZyjeK 355 ECs5127 357 STM4333 356 YPO0353 358 VC2661 359 HI0329 360 PM0099 361 XF2474 367 TP0121 ------------------------------------------------- Sub-family 5: 9 sequences 176 aq_1189 279 TP0500 178 TM0590 282 BB0718 258 HP1565 260 jhp1473 262 Cj0652 271 RP565 273 RC0852 ------------------------------------------------- Sub-family 6: 13 sequences 230 mrdA 232 ZmrdA 234 ECs0673 238 STM0640 236 YPO2604 242 VC0950 240 STM1910 247 HI0032 250 PM1924 245 PA4003 255 RSc0062 252 XF1312 269 CC1546 ------------------------------------------------- Sub-family 7: 1 sequences 181 FN1211 ------------------------------------------------- Sub-family 8: 34 sequences 183 CAC0329 191 CAP0150 189 CAC2130 214 lin2145 216 BS_pbpB 224 BH2573 205 L89079 210 SA1024 206 SPy1664 207 SP0336 218 BS_spoVD 223 BH2572 228 alr5045 226 sll1833 227 alr0718 280 TP0760 281 BB0136 184 CAC0506 185 CAC1245 187 CAC1247 186 CAC1246 190 CAC3683 217 BS_pbpC 209 SA0038 212 lin0461 225 BH3389 204 L137682 208 SP1673 211 SA1381 213 lin1477 215 BS_pbpA 219 BS_ykuA 221 BH1411 222 BH1894 ------------------------------------------------- Sub-family 9: 10 sequences 177 aq_556 180 FN1155 179 TM0870 275 CT270 277 CPn0419 276 CT682 278 CPn0694 257 HP1556 259 jhp1464 261 Cj0525c ------------------------------------------------- Sub-family 10: 5 sequences 194 Cgl2114 196 Rv2163c 199 MT2221 202 ML0908 201 ML0018 ------------------------------------------------- Sub-family 11: 15 sequences 229 ftsI 231 ZftsI 233 ECs0088 237 STM0122 235 YPO0549 239 STM1836 241 BU222 248 HI1132 249 PM0136 243 VC2407 256 RSc2850 244 PA2272 246 PA4418 251 XF0792 253 NMB0413 ------------------------------------------------- Sub-family 12: 9 sequences 263 AGc1971 267 BMEI0573 264 AGc3810 266 SMc01860 268 mll1561 265 SMa2295 270 CC2560 272 RP567 274 RC0855 ------------------------------------------------- Sub-family 13: 7 sequences 192 Cgl0043 195 Rv0016c 198 MT0019 193 Cgl1962 197 Rv2864c 200 MT2933 203 ML1577 ------------------------------------------------- Sub-family 14: 11 sequences 458 MA3805 459 DRA0108_1 470 YMR266w 471 YOL084w 472 SPAC24H6.13 460 L60836_1 462 lin2568_1 468 YLL005c 469 YLR241w 473 SPAC2G11.09 474 SPBC354.08c ------------------------------------------------- Sub-family 15: 1 sequences 182 DR1868 ------------------------------------------------- Sub-family 16: 3 sequences 220 BS_yrrR 461 SA1766_1 416 MJ1623_1 ------------------------------------------------- Sub-family 17: 2 sequences 188 CAC1688 417 MK0780 ------------------------------------------------- Sub-family 18: 4 sequences 344 MJ0634 455 YKL080w 463 BS_yqbO_1 475 ECU07g0450 ------------------------------------------------- Sub-family 19: 3 sequences 420 alr4881 451 XF2025 452 XF2061_2 ------------------------------------------------- Sub-family 20: 5 sequences 418 MK0793 419 MK1166 423 PA1975 424 SMb20163 425 mlr1131 ------------------------------------------------- Sub-family 21: 31 sequences 283 AF0821 286 MK1400 289 PH1868 290 PAB1131 292 SSO0354 293 APE1273 291 PAE2990 287 Ta1145 288 TVN1243 284 VNG2541Cm 297 TM0474 296 aq_1056 337 TP0628 338 BB0635 301 CAC1002 302 CAC1780 332 Cj0230c 304 Rv0573c 306 MT0601 316 alr2482 308 L107468 309 SPy1653 310 SP1421 311 SA1729 312 lin1077 313 BS_yueK 300 DRA0272 303 Cgl2467 305 Rv1330c 307 MT1372 298 FN0348 ------------------------------------------------- Sub-family 22: 19 sequences 285 MA2533 317 pncB 318 ZpncB 319 ECs1014 321 STM1004 320 YPO1413 322 BU361 324 PA4376 325 PA4919 328 NMB1505 327 XF1097 330 RSc1031 323 VCA0098 294 YOR209c 295 SPAC1486.06 333 AGc367 334 SMc02276 335 BMEI1836 336 mll4892 ------------------------------------------------- Sub-family 23: 9 sequences 299 DR0294 315 slr0788 331 RSp0836 326 PM0999 341 MPN047 342 MG037 314 BH3249 340 MYPU_4830 339 UU276 ------------------------------------------------- Sub-family 24: 7 sequences 370 MJ0007 371 MK0258 375 yjiM 376 ZyjiM 377 ECs5298 373 FN0208 374 CAC3622 ------------------------------------------------- Sub-family 25: 2 sequences 456 SPAPB2B4.05 457 ECU03g0500 ------------------------------------------------- Sub-family 26: 8 sequences 329 NMA1706 450 STM0901 446 Z0339_1 447 ECs0303_1 448 YPO0880_1 449 YPO1090 453 RSc1865_1 454 RSc2483_1 ------------------------------------------------- Sub-family 27: 3 sequences 411 L33782 422 VC1444 464 CAP0175 ------------------------------------------------- Sub-family 28: 3 sequences 465 SAP027 466 pli0023 467 NMB0495 ------------------------------------------------- Sub-family 29: 8 sequences 408 DR0066 415 mlr2696 414 SMc03094 412 PA4119 413 SMc02722 409 Rv3817 410 MT3925.1 421 VC0130_1 ------------------------------------------------- Sub-family 30: 5 sequences 386 AF0572 390 MK1498 387 MA1473 388 MTH1698 389 MJ0458 ------------------------------------------------- Sub-family 31: 1 sequences 254 NMA2072 ------------------------------------------------- Sub-family 32: 73 sequences 51 AF0076 64 SSO1579 52 AF0157 100 STM0612 60 PAE1263 67 APE2605 53 AF0175 57 VNG0830G 54 AF0499 102 STM1385 118 PM0723 56 AF2385 70 aq_1232 123 mll5613 68 aq_067 61 PAE2661 62 PAE2837 69 aq_1046 72 fdnH 84 ZfdnH 89 ECs2079 104 STM1569 73 fdoH 85 ZfdoH 95 ECs4819 108 STM4036 99 YPO4057 113 HI0007 117 PM0407 112 PA4811 122 SMa0005 111 VC1512 120 RSc2372 121 Cj1510c 55 AF1202 105 STM2064 59 PAB1390 63 PAE2860 65 SSO2759 75 nrfC 87 ZnrfC 96 ECs5054 109 STM4279 115 HI1067 116 PM0025 76 ydhX 80 Z2698 91 ECs2378 71 dmsB 83 ZdmsB 88 ECs0980 101 STM0965 103 STM1497 78 ynfG 79 Z2577 90 ECs2295 98 YPO3324 114 HI1046 119 PM1755 97 YPO2966 110 STM4306 82 Z3784 93 ECs3383 106 STM2529 74 hybA 94 ECs3881 86 ZhybA 107 STM3149 77 ydhY 81 Z2702 92 ECs2381 58 MA2963 66 SSO2794 ------------------------------------------------- Sub-family 33: 5 sequences 437 CAC2123 440 BS_sbp 441 BH2560 438 Rv1824 439 MT1872 ------------------------------------------------- Sub-family 34: 8 sequences 378 AF0282 382 MJ0068 379 VNG0879C 381 MA1372 383 MK0748 384 PH1312 385 PAB1804 380 VNG1264C ------------------------------------------------- Sub-family 35: 11 sequences 426 FN1791_2 436 PA3762 427 CAC0464 435 BH2593 431 SA1388_2 428 Cgl2188_2 429 Rv2230c_2 430 ML1639_2 432 lin1489_2 433 BS_yqfO_2 434 BH1380_2 ------------------------------------------------- Sub-family 36: 17 sequences 391 AF2066 396 MK1617 393 MA4113 399 PH0529a 400 PAB7387 394 MTH1612 395 MJ0049 397 Ta0054 398 TVN0010 404 YDL075w 405 YLR406c 406 SPAC890.08 403 APE1087 401 PAE3095 407 ECU03g0230 402 SSO5671 392 VNG2467G ------------------------------------------------- Sub-family 37: 4 sequences 442 YGR037c 443 SPBC1539.06 444 DR0166 445 RSc1366 -------------------------------------------------