CLUSS clustering result 
Executing time : 81 
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-------------------------------------------------

Number of sub-families: 31 
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Sub-family 1: 18 sequences

		0     AF1424
		2     MA1956
		3     MTH770
		5     MK0820
		4     MJ1108
		8     PH0657
		9     PAB2427
		1     VNG2505G
		10    PAE1669
		12    APE2305
		11    SSO0101
		17    ECU04g0900
		13    YLR060w
		15    SPAC23A1.12c
		6     Ta0551
		7     TVN0605
		62    TP0015
		63    BB0514
-------------------------------------------------
Sub-family 2: 43 sequences

		18    aq_1730_2
		19    TM0822_2
		20    FN2122_2
		22    CAC2356_2
		21    DR2357_2
		36    pheT_2
		37    ZpheT_2
		40    STM1338_2
		38    ECs2420_2
		39    YPO2428_2
		42    VC1220_2
		44    HI1312_2
		45    PM0629_2
		43    PA2739_2
		46    XF0742_2
		47    NMB0728_2
		48    NMA0937_2
		49    RSc1582_2
		27    L0355_2
		28    SPy0769_2
		29    SP0581_2
		30    SA0986_2
		31    lin1185_2
		32    BS_pheT_2
		33    BH3110_2
		34    sll1553_2
		35    alr4958_2
		23    Cgl1357_2
		24    Rv1650_2
		25    MT1688_2
		26    ML1402_2
		53    AGc445_2
		54    SMc00366_2
		56    mll5053_2
		55    BMEI2004_2
		57    CC1043_2
		60    CT475_2
		61    CPn0594_2
		50    HP0402_2
		51    jhp0979_2
		52    Cj0896c_2
		58    RP418_2
		59    RC0582_2
-------------------------------------------------
Sub-family 3: 1 sequences

		296   CAC3611
-------------------------------------------------
Sub-family 4: 6 sequences

		297   Rv3080c_2
		298   MT3165_2
		305   PA1759
		307   PA3420
		308   PA3921
		306   PA1760
-------------------------------------------------
Sub-family 5: 6 sequences

		299   malT
		300   ZmalT
		301   ECs4260
		303   STM3515
		302   YPO0123
		304   VCA0011
-------------------------------------------------
Sub-family 6: 5 sequences

		41    BU130_2
		64    UU457_2
		65    MYPU_3470_2
		66    MPN106_2
		67    MG195_2
-------------------------------------------------
Sub-family 7: 5 sequences

		162   NMA1611
		412   YDR159w
		413   SPCC576.05
		414   SPCC70.06
		415   ECU04g1260
-------------------------------------------------
Sub-family 8: 26 sequences

		270   SSO1333
		275   Cgl2279
		276   Rv0467
		279   MT0483
		274   DR0828
		290   RSc1358
		283   aceA
		285   ECs4933
		287   STM4184
		284   ZaceA
		286   YPO3725
		288   VC0736
		282   BH2677
		291   AGc1079
		292   SMc00768
		294   mll6527
		293   BMEI0409
		277   Rv1915
		280   MT1966
		281   ML1985
		289   PA2634
		295   CC1764
		271   YER065c
		272   YPR006c
		278   Rv1916
		273   SPBC1683.11c
-------------------------------------------------
Sub-family 9: 17 sequences

		364   CAC2956
		365   SPy1709
		366   SP0647
		367   SA0238
		371   BH0190
		370   lin2814
		372   gatC
		375   ZgatC
		376   ECs2895
		379   STM3260
		374   Z4877
		377   ECs4352
		380   STM3782
		368   lin0508
		373   sgcC
		378   STM1614
		369   lin2200
-------------------------------------------------
Sub-family 10: 73 sequences

		185   AF0186
		186   AF0564
		242   RSp0173
		194   aq_739
		188   MA2718
		189   MA3264
		198   CAC2234
		213   lin1548
		249   mll5865
		218   BS_yrvO
		220   BH1260
		205   L111126
		211   SA1450
		208   SPy1122
		210   SP1094
		190   YCL017c
		191   SPBC21D10.11c
		192   ECU11g1770
		252   RP486
		254   RC0730
		227   yfhO
		228   ZyfhO
		229   ECs3396
		231   YPO2896
		232   STM2543
		234   VC0748
		236   PA3814
		238   PM0318
		233   BU602
		239   NMB1379
		237   HI0378
		241   RSc1019
		235   PA2062
		223   slr0387
		225   alr2505
		230   YPO2138
		195   TM1692
		196   FN0058
		224   all1457
		243   HP0220
		244   jhp0206
		245   Cj0240c
		199   CAC2972
		212   SA1538
		200   Cgl1043
		206   L122222
		209   SP0880
		207   SPy0816
		214   lin1635
		221   BH3204
		217   BS_nifZ
		215   lin2130
		216   BS_nifS
		187   MA0808
		197   DR0215
		201   Cgl1203
		202   Rv3025c
		203   MT3109
		204   ML1708
		246   AGc3350
		247   SMc00529
		250   mlr0015
		248   BMEI1043
		251   CC1865
		222   sll0704
		226   alr3088
		193   aq_1053
		253   RP487
		255   RC0731
		256   CT258
		258   CPn0396
		219   BH1217
		260   TP0863
-------------------------------------------------
Sub-family 11: 6 sequences

		179   AF0028
		181   MA0722
		180   AF0181
		184   MK0229
		182   MTH1067
		183   MJ1678
-------------------------------------------------
Sub-family 12: 2 sequences

		257   CT721
		259   CPn0862
-------------------------------------------------
Sub-family 13: 5 sequences

		416   YAL021c_2
		421   SPCC31H12.08c_2
		417   YML118w
		418   YMR285c
		420   SPBC9B6.11c
-------------------------------------------------
Sub-family 14: 9 sequences

		261   AF1838
		267   TM1643
		262   MA0958
		263   MTH973
		264   MJ0915
		268   PA3505
		269   RSp0722
		265   MK0094
		266   PAE3114_2
-------------------------------------------------
Sub-family 15: 3 sequences

		381   MTH1145
		382   MJ0489
		383   MK0014
-------------------------------------------------
Sub-family 16: 18 sequences

		321   FN0469
		322   L56431
		323   SPy0408
		324   SP1260
		325   lin0025
		326   lin1017
		327   cutCm
		328   ZcutCm
		331   STM1907
		330   YPO2048
		337   mlr1122
		332   VC0730
		335   AGc4698
		338   CC2360
		336   SMc02879
		333   PM0526
		334   XF1341
		329   ECs2584
-------------------------------------------------
Sub-family 17: 2 sequences

		340   Rv1927
		341   MT1979
-------------------------------------------------
Sub-family 18: 39 sequences

		139   TM0066
		140   CAC0394
		145   BS_kdgA
		146   BH3723
		141   CAC2973
		142   L0022
		143   SPy0639
		144   SP0317
		150   eda
		151   Zeda
		152   ECs2560
		154   STM1884
		153   YPO2067
		158   HI0047
		159   PM0947
		168   AGl750
		171   SMc03153
		172   BMEII0009
		174   mlr2994
		165   HP1099
		166   jhp1025
		155   VC0285
		164   RSp1190
		178   TP0568
		156   PA3131
		161   NMB1394
		157   PA3181
		160   XF1061
		170   SMc02043
		149   dgoA_1
		163   RSc2752
		176   CC0784
		167   AGc1269
		169   SMc00882
		173   BMEII0358
		175   mlr4743
		147   sll0107
		148   all4771
		177   CC1495
-------------------------------------------------
Sub-family 19: 10 sequences

		77    YJR137c_3
		78    SPAC10F6.01c_3
		392   Cgl0883
		393   L13744
		394   SPy2162
		398   NMB1955
		396   SAP005
		395   SP1625
		397   all3255
		419   YOL042w
-------------------------------------------------
Sub-family 20: 2 sequences

		339   VNG1746C
		342   BS_yqjF
-------------------------------------------------
Sub-family 21: 20 sequences

		343   L51420_1
		344   SPy0980_1
		347   lin0080_1
		348   lin2418_1
		349   Z1818_1
		350   ECs1557_1
		352   YPO2126
		360   XF2506_2
		362   BMEI0899
		363   BMEI1663
		351   YPO2093
		354   PA2423
		355   HI1418
		356   XF0684_1
		361   XF2524_1
		359   XF1663_1
		357   XF0704
		358   XF1645
		345   SPy2127
		346   SPy2128
-------------------------------------------------
Sub-family 22: 4 sequences

		384   MA4548
		386   MJ0844
		385   MTH1166
		387   MK0653
-------------------------------------------------
Sub-family 23: 54 sequences

		69    MA0361
		70    MA0363
		75    MJ0298
		87    CAC0203
		85    FN1037
		406   SMa0616
		72    MA2699
		97    BS_ykuN
		98    BS_ykuP
		92    L197697
		93    SPy0721
		94    SP1297
		95    lin1822
		79    FN0029
		82    FN0513
		88    CAC0587
		138   TP0925
		89    CAC2452
		81    FN0472
		137   Cj1382c
		83    FN0724
		135   HP1161
		136   jhp1088
		99    sll0248
		100   alr2405
		102   fldB
		107   ZfldB
		111   ECs3767
		120   STM3045
		114   YPO0893
		125   VC2420
		101   fldA
		106   ZfldA
		109   ECs0715
		118   STM0694
		117   YPO2635
		127   HI0191
		129   PM0353
		124   VC2099
		122   BU299
		103   mioC
		108   ZmioC
		112   ECs4684
		121   STM3875
		113   YPO0001
		128   HI0669
		130   PM1484
		123   VC0002
		104   yqcA
		105   Z4106
		110   ECs3650
		119   STM2963
		115   YPO1039
		126   PA3435
-------------------------------------------------
Sub-family 24: 15 sequences

		68    AF2332
		71    MA0407
		91    CAC3664
		76    MK0288
		73    MTH1799
		132   RSc0187
		133   RSc1509
		74    MTH847
		96    lin2257
		131   XF1198
		84    FN0772
		86    FN1822
		80    FN0119
		90    CAC3417
		422   ECU11g0770_2
-------------------------------------------------
Sub-family 25: 5 sequences

		353   PA1153
		391   PA0806
		388   DR2024
		390   all4478
		389   SA1937
-------------------------------------------------
Sub-family 26: 1 sequences

		240   NMA1594
-------------------------------------------------
Sub-family 27: 13 sequences

		116   YPO2003
		318   Cj0785
		319   AGl919
		320   SMa1239
		309   napD
		310   ZnapD
		311   ECs3096
		313   STM2260
		312   YPO3039
		316   HI0343
		317   PM1593
		314   VCA0677
		315   PA1175
-------------------------------------------------
Sub-family 28: 3 sequences

		14    YPR047w_2
		16    SPCC736.03c_2
		134   RSc1510
-------------------------------------------------
Sub-family 29: 1 sequences

		399   NMA0496
-------------------------------------------------
Sub-family 30: 6 sequences

		400   VC1440
		401   NMA1978
		402   RSc1278
		403   HP0146
		404   jhp0134
		405   Cj1488c
-------------------------------------------------
Sub-family 31: 5 sequences

		407   SMa0767
		408   SMa1214
		409   msl6627
		410   msr6413
		411   CC1403
-------------------------------------------------
